analogs finder
1.0.0
  • Installation
  • Getting Started
  • ChangeLog
analogs finder
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Analogs Finder¶

Analogs finder is a python based query-search engine for drug discovery. It allows the user to perform queries based on molecule similarity or substructure matching to retrieve similar analogs from your initial molecule.

Github : https://github.com/danielSoler93/analogs_finder

Molecule query and its search result:

_images/query_result.png

Documentation¶

  • Installation
    • From Conda (recommended)
    • From PyPi
    • From Source Code
  • Getting Started
    • From python API
      • Download examples
      • Load your query molecule and your database
      • Analyze your dataset
      • Most Similars n Molecules
      • Tanimoto Similarity Search
      • Substructure Search
      • Combinatorial Substructure Search
      • Similarity and Substructure hybrid search
      • Use different fingerprints
      • Use all four fingerprints to query one database with different tresholds
      • Turbo search method:
      • PostFilter by:
        • Position of growing
    • From Command Line
      • Analyze your dataset
      • N most similar structures
      • Tanimoto similarity search
      • Search for one or more substructure
      • Search for at least one of the substructures in each sdf file
      • Search for similarity and substructure
      • Change fingerprint type
      • Use all fingerprints in one job with different tresholds
      • Turbo search method:
      • PostFilter by:
        • Position of growing
  • ChangeLog
    • 1.2.0
    • 1.1.0
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© Copyright 2019, Daniel Soler Viladrich

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